Analysis of Genetic Diversity in Rainfed Rice Accessions by SSR Markers

Date Received: 05-06-2025

Date Published: 13-06-2025

##submissions.doi##: https://doi.org/10.31817/tckhnnvn.2012.10.1.

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Issue: Vol. 10 No. 1 (2012)

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NÔNG HỌC

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Thu, H., & Van, C. (2025). Analysis of Genetic Diversity in Rainfed Rice Accessions by SSR Markers. Vietnam Journal of Agricultural Sciences, 10(1). https://doi.org/10.31817/tckhnnvn.2012.10.1.

Analysis of Genetic Diversity in Rainfed Rice Accessions by SSR Markers

Hien Vu Thi Thu (*) , Cuong Pham Van

  • Tác giả liên hệ: [email protected]

    • Keywords

    Genetic diversity, Rice, SSR markers

    Abstract


    The objective of this study was to analyze genetic diversity of 64 rainfed rice accessions by detecting the presence and degree of polymorphisms of simple sequence repeat (SSR) markers. Thirty-four SSR markers were used. There were eight SSR markers that do not show polymorphism and two markers are monomorphic. A total of 90 alleles were detected at twenty-four SSR marker loci with average 3.75 alleles per locus. With the genetic similarity coefficient of 0.65 the rice accessions were grouped into 7 main clusters. Most of rice accessions were found in two groups toghether with two controls CH5 and LC93-1. Information of SSR marker polymorphisms are useful for drought tolerance breeding in rice.

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